Environmental stress level to model tumor cell growth and survival

01/18/2022
by   Sabrina Schönfeld, et al.
0

Survival of living tumor cells underlies many influences such as nutrient saturation, oxygen level, drug concentrations or mechanical forces. Data-supported mathematical modeling can be a powerful tool to get a better understanding of cell behavior in different settings. However, under consideration of numerous environmental factors mathematical modeling can get challenging. We present an approach to model the separate influences of each environmental quantity on the cells in a collective manner by introducing the "environmental stress level". It is an immeasurable auxiliary variable, which quantifies to what extent viable cells would get in a stressed state, if exposed to certain conditions. A high stress level can inhibit cell growth, promote cell death and influence cell movement. As a proof of concept, we compare two systems of ordinary differential equations, which model tumor cell dynamics under various nutrient saturations respectively with and without considering an environmental stress level. Particle-based Bayesian inversion methods are used to quantify uncertainties and calibrate unknown model parameters with time resolved measurements of in vitro populations of liver cancer cells. The calibration results of both models are compared and the quality of fit is quantified. While predictions of both models show good agreement with the data, there is indication that the model considering the stress level yields a better fitting. The proposed modeling approach offers a flexible and extendable framework for considering systems with additional environmental factors affecting the cell dynamics.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
03/06/2023

The stress-free state of human erythrocytes: data driven inference of a transferable RBC model

The stress-free state (SFS) of red blood cells (RBCs) is a fundamental r...
research
02/13/2023

Propagation of weakly advantageous mutations in cancer cell population

Studies on somatic mutations in cancer cells DNA, their roles in tumor g...
research
03/25/2021

Parallel Model Exploration for Tumor Treatment Simulations

Computational systems and methods are being applied to solve biological ...
research
04/08/2023

Interpretable machine learning-accelerated seed treatment by nanomaterials for environmental stress alleviation

Crops are constantly challenged by different environmental conditions. S...
research
08/25/2020

Modeling Cell Populations Measured By Flow Cytometry With Covariates Using Sparse Mixture of Regressions

The ocean is filled with microscopic microalgae called phytoplankton, wh...

Please sign up or login with your details

Forgot password? Click here to reset