Residual Embedding Similarity-Based Network Selection for Predicting Brain Network Evolution Trajectory from a Single Observation

09/23/2020
by   Ahmet Serkan Goktas, et al.
0

While existing predictive frameworks are able to handle Euclidean structured data (i.e, brain images), they might fail to generalize to geometric non-Euclidean data such as brain networks. Besides, these are rooted the sample selection step in using Euclidean or learned similarity measure between vectorized training and testing brain networks. Such sample connectomic representation might include irrelevant and redundant features that could mislead the training sample selection step. Undoubtedly, this fails to exploit and preserve the topology of the brain connectome. To overcome this major drawback, we propose Residual Embedding Similarity-Based Network selection (RESNets) for predicting brain network evolution trajectory from a single timepoint. RESNets first learns a compact geometric embedding of each training and testing sample using adversarial connectome embedding network. This nicely reduces the high-dimensionality of brain networks while preserving their topological properties via graph convolutional networks. Next, to compute the similarity between subjects, we introduce the concept of a connectional brain template (CBT), a fixed network reference, where we further represent each training and testing network as a deviation from the reference CBT in the embedding space. As such, we select the most similar training subjects to the testing subject at baseline by comparing their learned residual embeddings with respect to the pre-defined CBT. Once the best training samples are selected at baseline, we simply average their corresponding brain networks at follow-up timepoints to predict the evolution trajectory of the testing network. Our experiments on both healthy and disordered brain networks demonstrate the success of our proposed method in comparison to RESNets ablated versions and traditional approaches.

READ FULL TEXT
research
09/23/2020

Foreseeing Brain Graph Evolution Over Time Using Deep Adversarial Network Normalizer

Foreseeing the brain evolution as a complex highly inter-connected syste...
research
07/13/2019

Image Evolution Trajectory Prediction and Classification from Baseline using Learning-based Patch Atlas Selection for Early Diagnosis

Patients initially diagnosed with early mild cognitive impairment (eMCI)...
research
06/17/2021

Predicting cognitive scores with graph neural networks through sample selection learning

Analyzing the relation between intelligence and neural activity is of th...
research
09/14/2021

Identifying partial mouse brain microscopy images from Allen reference atlas using a contrastively learned semantic space

Precise identification of mouse brain microscopy images is a crucial fir...
research
08/09/2021

Unified Regularity Measures for Sample-wise Learning and Generalization

Fundamental machine learning theory shows that different samples contrib...
research
10/06/2021

Recurrent Multigraph Integrator Network for Predicting the Evolution of Population-Driven Brain Connectivity Templates

Learning how to estimate a connectional brain template(CBT) from a popul...
research
09/23/2020

Supervised Multi-topology Network Cross-diffusion for Population-driven Brain Network Atlas Estimation

Estimating a representative and discriminative brain network atlas (BNA)...

Please sign up or login with your details

Forgot password? Click here to reset